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3rd experimental approach of Origins of Life research
III) study of
the Origins of Self-Replicating Chemical
Systems...
► a key
characteristic of life is self-replication... Can molecules
self-replicate???
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A) Evolution of an RNA
WORLD*
(which came 1st DNA or RNA) |
in 1989 Sidney Altman and
Thomas Cech - received
Nobel Prize
for demonstrating that RNA molecules may
have Catalytic Activity
(RIBOZYMES*)
i.e., these RNA's catalyze hydrolysis & condensation rxs
of phosphodiester bonds. |
If
RNA can
catalyze polymerization of like molecules maybe it
can be a template also,
akin
to DNA -->
figure* i.e., replicate itself, then RNA
molecules may have been the
1st SELF-REPLICATING living entity.
No self-replicating
RNA molecules exists naturally today, but lab experimentation may
establish that it was feasible, and that
RNA molecules can be selected for via
Darwinian evolutionary mechanisms (natural selection).
In fact,
a
self-replicating spontaneously forming RNA may be a real statistical improbability.
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Main criticisms of an RNA
World...
1. how did the 1st
self-replicating RNA arise (actually an
improbable chemical event
for)?
each nucleotide is a very
complex molecule with 10-C's, 2to5-N's, 4or5-O's, & 1
P.
spark discharge experiments (Miller 1953) DO NOT form nucleotides
meteorites DO NOT contain great amounts of nucleotides
some labs have made nucleotides, but only by elaborate &
complex "prebiotic"
chemistry
& even if
random assembly of nucleotides was possible, it is likely that
many might be
defective nucleotides & would prevent
further replication-like activity.
So...
B)
a Metabolism First model
- a thermodynamic replicator-
for origins of life???
a world based upon thermodynamic definitions of life rather than genetic
it is likely that early forms of
metabolism predated
genetics. Metabolism here means a
cycle of chemical reactions that produce energy in a pattern that can be
harnessed by
other processes. The idea is that once a primitive metabolic cycle was
established, it began
to produce ever more complex compounds, and
possibly evolved replication ability.
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5
Requirements for a Thermodynamic (Metabolism
first) life system:
1. a boundary to
separate life from non-life: [compartmentation]
life requires organization (a
localized region where order can form and be maintained).
2nd law of
thermodynamics requires universe to move in a direction where
disorder goes up.
today's cells have membranes, but
1st
system's may have had
iron-sulfide surfaces*, i.e.,
electrostatic
minerals that segregated molecules from their environment
(such as...
iron pyrites at
hydrothermal vents or lipid droplets on mineral surfaces).
A role for the
hydrothermal vents in
?...
Origin of Metabolism
Gunter Wachterschauser (German biochemist) has
speculated that origins of
bioorganic chemical reactivity may have
originated near hydrothermal vents.
> earliest primordial biochemical cycles
may have functioned there...
> metabolic cycles likely predate cells...
took place on mineral surfaces that acted as catalysts & surfaces for early
reactions
√
key reaction may have been a
reductive reaction
CO + oxidation vent minerals --> redox rx. ns
in 1997
Wächtershäuser
used CO, H2S, NiS, & FeS to make amino acids &
peptides.
adding acetic acids ---> pyruvate + NH3 --->
amino acids.
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Waechtershaeuser believes life emerged on a flat
area where mineral surfaces
could spark chemical processes leading to living cells.
Researchers including M.J. Russell,
M.M. Hanczyc, D. Deamer, C. Huber, and G. Cody
have synthesized amino
acids and assembled/disassembled polypeptides
under vent like conditions,
thus
reductive reactions of common metabolism (glycolysis & Krebs cycle) could have
formed outside
of cell membranes and eventually become encapsulated.
2. an
energy source is needed to drive organization:
[an external energy supply - redox rx]
redox reaction transfer electrons
from energy rich molecules (reduced -
H2S)
to energy poor
molecules (oxidized - CO).
3. a
coupling mechanism to link energy release to organization
processes (life):
[driver reactions - coupled reactions]
4. a
chemical network that is formed which permits adaptation and
evolution:
[metabolic reactions - compartment cycles]
MetalH2
+ BO --> BH + CO --> CH + DO --> DH + MO --> MetalH2
a cycle*
metabolite D converts M back into the
reduced mineral; a reaction sequence
that would be favored, for it replenished MH2 with a useful discharge of
energy
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5. a
chemical network that must grow & reproduce
[mechanism of reproduction]
metabolic pathway must gain
material faster than it loses it; some diffusion out of
compartmentalized cycle is entropically favored, but if the encapsulation is by a
lipid membrane, we might
envision "fission" after the encapsulated material grows in mass.
Metabolism First systems are changing the
Paradigm*:
these life systems are
metabolically based, not genetically based,
and there is no information-like molecule that must be duplicated.
Once formed
replicating metabolic cycles could be favored by molecular Natural
Selection:
Carl Sagan:
"Life is a localized region that increase in ORDER
(decrease in Entropy)
through metabolic cycles driven by energy flow."
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